Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNEMSVLALENLRVLLSEHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
3N3Y Chain:A ((9-216))
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDKELIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAREFLVFVDNEKVNAMSVLALENLRVLLSEHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPGEHQYLFEDCLKH
General information:
TITO was launched using:
RESULT:
Template:
3N3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91211 for 1547 contacts (-59.0/contact) +
2D Compatibility (PS) -22350 + (NN) -9589 + (LL) 0
1D Compatibility (HY) -29600 + (ID) 10100
Total energy: -162850.0 ( -105.27 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3N3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3Y-query.scw
PDB file :
Tito_Scwrl_3N3Y.pdb
: