Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFGLNIDHIVTLREVRKTYEPEILEALFIAKNTHKVDLITIHLREDKRHIQNEDVLRLLEISPLPINIECSINAEITDFLCSLKNKPSKVTIVPENRNEVTTEGGLDCSLKGLEEVIRAYHNKGIEVSLFVDPLKDALHFAKEHQVKQVEFHTGVYANLHNALYSNANNQIHAISTLKDKCPKELKEELHNAFLQLRRMSKEAFFMGIVVCAGHGLNYSNVKELLKIPSLRELNIGHSVVSKAVLVGLEKAILEMAQLIKR
3O6C Chain:A ((6-260))
--LGVNIDHIAVLRQARMVNDPDLLEAAFIV--ARHGDQITLHVREDRRHAQDFDLENIIKFCKSPVNLECALNDEILNL--ALKLKPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNALFSNISHTAFALKEL-DQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVKPVVKIKEICELNIGQSIVARSVFTGLQNAILEMKELIKR
General information:
TITO was launched using:
RESULT:
Template:
3O6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168927 for 2167 contacts (-78.0/contact) +
2D Compatibility (PS) -27874 + (NN) -16819 + (LL) 588
1D Compatibility (HY) -20800 + (ID) 5750
Total energy: -239582.0 ( -110.56 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3O6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O6C-query.scw
PDB file :
Tito_Scwrl_3O6C.pdb
: