Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVSVDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLKDVIATATYAVVFSAIILTVAGVLLAKPLLILLRT---PANILDDSTIFLTTLFIGILPMSLYNGMAAILRALGNSITPLIFLILSSLMNIALDFLFVVYMDMGVRGAAIATVLSQTAAAIAVIYYAY-RHVPFMRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSL-INGFGSSVVAAYTAASRIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGITILVQLFARQFLLLFVDSSETEVINIG-VSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGIFE-LVSRLVIGFVLSLY--IGYVGLWWATPVAWITATILG-VW-RYKSGAWQKKAVIRRK |
| 3VVN Chain:A ((14-454)) | -------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGADNV---AVHSLILSLILGVTITITMLPAIDSLFRSMGA--EAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLRDFSPSREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFT----AQVIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -406045 for 3756 contacts (-108.1/contact) +
2D Compatibility (PS) -43425 + (NN) -1703 + (LL) 2028
1D Compatibility (HY) -36400 + (ID) 5950
Total energy: -491495.0 ( -130.86 by residue)
QMean score : 0.363
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