Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKR-------HKSNPNYGFVGN--PFSKSGWTIYPPALVNQVKKYT-GSAKNMTGTNLAGIKNQLNKKRPVV----------------AWVSKFHGFSV----HAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
| 3ERV Chain:A ((31-223)) | --------------------------------------------------------------------------------------------------------------KVILSNVPFIQQLPELDRGCEVTSLAMMLQYAGITVDKMKLANEIKKVDFMNDGVRGNPNEGFVGNIYTFSESGYGVYHGPLFQLAKKYLPNKAVDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQESVYIRDPLKDSLDVKVPREKFEQAWVQMGSQAISY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ERV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -56623 for 1264 contacts (-44.8/contact) +
2D Compatibility (PS) -17579 + (NN) -7714 + (LL) 6216
1D Compatibility (HY) -15600 + (ID) 3200
Total energy: -94500.0 ( -74.76 by residue)
QMean score : 0.519
|
|
|