Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQNIGFIAPKQ---TGIGVGLVGRVDHKSGV--------WLEIEPGKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHL------NSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQ-KIQDNLQSNTIRFVTKGVVRSKLEK--DKVGLIGAAVIGMRLGNEGGKE |
| 2QM1 Chain:A ((6-324)) | ----KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGK--HIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQ-------IESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNG-FDCTCGKRGCLETVSSATGVVRVA-RHLSEEFAGDSELKQAIDDGQ-DVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQV-RNSTKIKLAELGNEAGVIGAASLALQFSK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126393 for 2592 contacts (-48.8/contact) +
2D Compatibility (PS) -31699 + (NN) -13247 + (LL) 876
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -192263.0 ( -74.18 by residue)
QMean score : 0.374
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