Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPEDSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNYNILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSAE |
| 2L2T Chain:A ((74-79)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVRRKS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -356 for 14 contacts (-25.4/contact) +
2D Compatibility (PS) -529 + (NN) 488 + (LL) 17628
1D Compatibility (HY) -400 + (ID) 50
Total energy: 16781.0 ( 1198.64 by residue)
QMean score : 0.161
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