Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEWEGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF
2VRZ Chain:A ((6-98))
----IKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGL
General information:
TITO was launched using:
RESULT:
Template:
2VRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2989 for 515 contacts (-5.8/contact) +
2D Compatibility (PS) -10160 + (NN) -1763 + (LL) 128
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -26034.0 ( -50.55 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_2VRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VRZ-query.scw
PDB file :
Tito_Scwrl_2VRZ.pdb
: