Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQKTEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTSGETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAGGIYVAARNVFE |
2YCU Chain:A ((946-979)) | ----------------------------------------------------------TELNYNGVPELTERKDTFFAQQWTGVKSSAETYK------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9559 for 128 contacts (74.7/contact) +
2D Compatibility (PS) -3464 + (NN) 773 + (LL) 10196
1D Compatibility (HY) -800 + (ID) 550
Total energy: 15714.0 ( 122.77 by residue)
QMean score : 0.457
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