Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKTIEMDGTTYDFTYEDLVWSITFPKSKTRAKELAQLELLEKPATHFTPAKISSDSDSYTISYEIAPRTYGFEQVRKMGREDKLRALRNIADLGELLNTRYTFFLHPDNLIFDINLVPSIVHRGIKNILPPYELTEETFFKQYQCFVIAMFSKKFSFENLYNGSLSGARGTQFEKSILDAKTVQDIATILEEAYMKEHAAVQKNMASVPKKKYSTFRGLAVGFIIVAILLAIPVSYFAFVKVPLQNDLLTANENFLKTDYDKVITGLENVDPEKMPQSVQYELAYSYVKGEKMSDKKKENIMNTISLKSDAKNLLYWIYNGRGEFSKSLDIAKLLDDPTLAMYSLTKQIEQVQSDTTLSGDEKVEKLKTLEESLKEYDEKVNESTTTEDETTNTEAK |
2YNQ Chain:A ((7-142)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKQEAYIQSTELFLQNKYSDVITTLEDYAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKTDEQYMLYWIYIGRSQSEEALELARTIEDRDLIVYALLKYREQIKGDTDLSGDEKQKKLDEIDQEIKEYE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23928 for 953 contacts (-25.1/contact) +
2D Compatibility (PS) -14576 + (NN) -9163 + (LL) 19828
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -43139.0 ( -45.27 by residue)
QMean score : 0.574
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