Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS-GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKK--LAYEEMQNYIRKNYSDYPFK--DELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
2CWC Chain:A ((8-290)) | -----------------QDRRLGAFLGLAVGDALGAQVEGLPKGTFPE--VREMKGGGPHRLPPGFWTDDTSQALCLAESLLQRGFDPKDQMDRYLRWYREGY------------ATRRALERY---AATGDPYAGDEAGAGNGPLMRLAPLVLAYENHPDL---LSLARRAARTTHGAREALEATEVLAWLLREALRGAPKEALLALE-------------PFRGADLHPALRRVVEGGFWEAPE---EGPGYAPGTLAAALWAFARGRDFEEGMRLAVNLGGDADTVGAVYGQLAGAYYGLGAIPGRWLRALHLREEMEALA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170413 for 2469 contacts (-69.0/contact) +
2D Compatibility (PS) -27551 + (NN) -3020 + (LL) 3592
1D Compatibility (HY) -9600 + (ID) 4300
Total energy: -211292.0 ( -85.58 by residue)
QMean score : 0.466
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