Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVD--LVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMRMDGMLSNEDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
4MG4 Chain:A ((18-249))
-------FRSLHRAGQPLALFNVWDAGSARVVADAGAVALATGSWSVAAANGFV--EQMPRALMMEVLERIVRATDLPVTVDLESGYGERPEDVAETIAMSIRAGAIGCNLEDSFPSTGE--LRDVDEAAARIAAARQAADRAGVDYFINARTDVFFKAATETHDERLLDATLARARAYAAAGADGLFVPGLRSPALIRALTAASPLPVNVMRVAETPTLAELAEYGVARISHGPYPYLQA------------------
General information:
TITO was launched using:
RESULT:
Template:
4MG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159003 for 1976 contacts (-80.5/contact) +
2D Compatibility (PS) -24974 + (NN) -10386 + (LL) 1608
1D Compatibility (HY) -15200 + (ID) 4750
Total energy: -212705.0 ( -107.64 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_4MG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MG4-query.scw
PDB file :
Tito_Scwrl_4MG4.pdb
: