Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKITAPRIPDGDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVF------DSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIGMNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEA---------GAYT-NSDFSGAQLVDTYLERLDLNKAQFLNCALNGIDLSSCIFESITAMPQDLKGMSIDFSHAPALMPLFGIRVK
2XTX Chain:A ((33-215))
--------------------------------------------FSGADLSGTEFIGCQFYDRESQKGCNFSRAMLKDAIFKSCDLSMADFRNSSALGIEIRHCRAQGADFRGASFR----CSAYITNTNLSYANFSKVVLEKCELWENRWIGAQVLGATFSGSDLSGGEFSTFDWRAANFTHCDLTNSELGDLDIRGV-----DLQGVKLDNYQASLLMERLGIAV-
General information:
TITO was launched using:
RESULT:
Template:
2XTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -188838 for 1224 contacts (-154.3/contact) +
2D Compatibility (PS) -16037 + (NN) 5687 + (LL) 3400
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -206238.0 ( -168.50 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_2XTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XTX-query.scw
PDB file :
Tito_Scwrl_2XTX.pdb
: