Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKTTQMNSEIFQINLEKTLKEIMVAKGLQSDEIRFVIVPVEEKGKMLDGSDEMMKRLVLTKENIGNKQLVLKDVVDVLGGLFPKAPIWINVSFLEMNGEKAIFKLETSLRFRKPTLLRNAETGHAPFKAIT |
3JYU Chain:A ((73-108)) | -------NSGLFSDPESQTLKEHLI------DELDYVLVPAEAWNKLLN----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2299 for 147 contacts (15.6/contact) +
2D Compatibility (PS) -3594 + (NN) 1184 + (LL) 6968
1D Compatibility (HY) -3200 + (ID) 750
Total energy: 2907.0 ( 19.78 by residue)
QMean score : 0.196
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