Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVRKTMYTSNNQIKEEKNVTAIA---ITSERGLCGAYNSEVFAEIDQLIESLGDQ-VTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTELIEVDYVLDFETDDEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDN---IQKQLEEAIFDARKQALQQKTGELLDIISGAQTIRKDEE |
| 3OAA Chain:G ((7-284)) | -------RSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLP-LPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQ---ELTEIVSGAA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121768 for 1963 contacts (-62.0/contact) +
2D Compatibility (PS) -29296 + (NN) -14398 + (LL) 1112
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -182400.0 ( -92.92 by residue)
QMean score : 0.522
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