Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFA----SADAEQAERIFERLNKRKQTESRRSNDK
4XD7 Chain:H ((4-109))
IHVSVVTPDGPVYEDDVE-VSVKAKS-ELGILPGHIPLVAPLEISAARLKKGGK---IAVSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRLQSQ-------
General information:
TITO was launched using:
RESULT:
Template:
4XD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65803 for 599 contacts (-109.9/contact) +
2D Compatibility (PS) -9897 + (NN) 681 + (LL) -536
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -81055.0 ( -135.32 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_4XD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XD7-query.scw
PDB file :
Tito_Scwrl_4XD7.pdb
: