Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAG-FLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK
3I3N Chain:A ((104-142))
---------------------------------------------------------------------------------------------------------RIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLS-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3I3N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25686 for 192 contacts (-133.8/contact) +
2D Compatibility (PS) -3977 + (NN) -768 + (LL) 15492
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -19389.0 ( -100.98 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_3I3N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I3N-query.scw
PDB file :
Tito_Scwrl_3I3N.pdb
: