Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVS---VMLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
3B0L Chain:A ((72-145))
-------------------GINPQEKVKIEKEPMKLFMENGIEELAKIPIEEIDQSKLTKDDIDVRLKWLGLFHRRKNQYGRFMMRLKLPNGV---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5481 for 380 contacts (-14.4/contact) +
2D Compatibility (PS) -7355 + (NN) -1581 + (LL) 4512
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -15905.0 ( -41.86 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_3B0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B0L-query.scw
PDB file :
Tito_Scwrl_3B0L.pdb
: