Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTTY--NISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
4GGG Chain:A ((18-82))
--------------IFKALGDYNRIRI-MELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSAHVVKAKRQGQSMIYSLD-------------------
General information:
TITO was launched using:
RESULT:
Template:
4GGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32502 for 392 contacts (-82.9/contact) +
2D Compatibility (PS) -6367 + (NN) 220 + (LL) 2816
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -43033.0 ( -109.78 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4GGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GGG-query.scw
PDB file :
Tito_Scwrl_4GGG.pdb
: