Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYLNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSAMILVFGDLQNFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA
3GE6 Chain:A ((4-211))
-TQTATDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLAPLAKFNQVQVETSSAVIAVFGDMKAIDQLENIYDTAVEKGLMPQEVRDRQVPAIQGMYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGMEKDRYVPVMLLSIGKAVDAGYPSVRLPINDIADW-
General information:
TITO was launched using:
RESULT:
Template:
3GE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85317 for 1515 contacts (-56.3/contact) +
2D Compatibility (PS) -22811 + (NN) -12445 + (LL) 352
1D Compatibility (HY) -24000 + (ID) 5750
Total energy: -149971.0 ( -98.99 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_3GE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE6-query.scw
PDB file :
Tito_Scwrl_3GE6.pdb
: