Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDSAVPRFPLSELEAVLADEELYLAFSEWFSEAFLDVLKKYPNDRFAINIAPQQLFYIETLHWLDKLKSESHRITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVMSYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQGYLVNKPFPV
3KZP Chain:A ((5-235))
----KFQLFIQPKLDVLQGNIVEYEILLRDDSAVPRFPLSELEAVLADEELYLAFSEWFSEAFLDVLKKYPNDRFAINIAPQQLFYIETLHWLDKLKSESHRITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVMSYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQGYLVNKPFPV
General information:
TITO was launched using:
RESULT:
Template:
3KZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153766 for 1746 contacts (-88.1/contact) +
2D Compatibility (PS) -25187 + (NN) -17232 + (LL) 420
1D Compatibility (HY) -39600 + (ID) 11550
Total energy: -246915.0 ( -141.42 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_3KZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZP-query.scw
PDB file :
Tito_Scwrl_3KZP.pdb
: