Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRW-MINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPIVKVTRILVEI-IELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLSKKPITISSHENLLDQVDSFQTGNGLLTR
4RFA Chain:A ((44-214))
---------------------------------DEKAKSIFFIVEGYAAVELEDNLRKTNYISIFVLPYNVLGIDAF---SSYP--KHSITVMSESLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGMIAKTPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKK--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79088 for 1053 contacts (-75.1/contact) +
2D Compatibility (PS) -17647 + (NN) -3261 + (LL) 3752
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -109994.0 ( -104.46 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_4RFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RFA-query.scw
PDB file :
Tito_Scwrl_4RFA.pdb
: