Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LYEKLVNKYQDEVTIREEKMPYKLPGLYLNGMIFISKDQSSIEKGCVLVEELMHYKYTVGNITKQETIMDKKQEIFARRKGYEELIPLDDIIACF-YLGLREYFEVAEFLEVTEEFLRHTVSHYAEKYGPMYDYGGYFINFGNSIDVYKKF
2WZF Chain:A ((343-400))
---------------------------------------------------------------------EERKSIFDLRKGLQDAFRSDSLLQLYDFLGADKFKEVFKLKEAQSKYINEHISEFSEK------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23167 for 278 contacts (-83.3/contact) +
2D Compatibility (PS) -6118 + (NN) -2974 + (LL) 6224
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -31135.0 ( -112.00 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_2WZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WZF-query.scw
PDB file :
Tito_Scwrl_2WZF.pdb
: