Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEVNDTTYILRFNKQKVK-TVELTSGISLVAALTANKGILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR
4CVU Chain:A ((858-898))
--KVSDPKLHLSYNKSTKKFTVEATAGVSLYTWLTHPAGVLGF----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8923 for 152 contacts (-58.7/contact) +
2D Compatibility (PS) -4041 + (NN) 837 + (LL) 6072
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -10505.0 ( -69.11 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_4CVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CVU-query.scw
PDB file :
Tito_Scwrl_4CVU.pdb
: