Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASG--SPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGL--LQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPA---LSTGNPNTGTKQDVAGEAANMM--TKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFS------DVTGELDKTTGD--FVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALN---QQYLSNQTYFLQISGLKYTFTDTDDLDHAYKVASVTTEDG-TPLKTDQKYKVVINDFLFGGGDGFSAFKKAN--LVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 2Z1A Chain:A ((28-527)) | --------------------------------------FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVW---------ARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFM---HRLRYRAMALGNHEFDLGPGPLADFLKG-----------------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREI--SNPGPTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGEDLKLARRLVGVQVIVGGHSHTLLGSFPHKELSPAGPYPTVV--KNPEGKDVLV-----VQAWEWGKVVGLLEVTFDAKGELLAYKGEALLMTPEAAPEDFFAKEA-----LLAYAQPVMALMQQVIAE----AKVDLVG-----ERAVVRRRESNLGNLITDGMLWKTRNAGTQI--ALQNGGGIRASIP------KGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWENTAGRFLQVSGLRYAFDLSRPAGSRVVRVEVKTEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKEL----KVVEAGLEGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114577 for 4219 contacts (-27.2/contact) +
2D Compatibility (PS) -51743 + (NN) -20358 + (LL) 11096
1D Compatibility (HY) -34000 + (ID) 7950
Total energy: -217532.0 ( -51.56 by residue)
QMean score : 0.489
|
|
|