Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK
3ZUK Chain:A ((93-135))
-----------------------------------------------TQVRDLIIQASQAGAAVGTDAQRIGDLYASFL-DEEAVERA------
General information:
TITO was launched using:
RESULT:
Template:
3ZUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4902 for 193 contacts (25.4/contact) +
2D Compatibility (PS) -4526 + (NN) -2404 + (LL) 2988
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -1390.0 ( -7.20 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_3ZUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZUK-query.scw
PDB file :
Tito_Scwrl_3ZUK.pdb
: