Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAKSQQAEAQLQLLKKEQSAAKDFLQDLQRQQNEQEWLAEDVARVHQEER-------ESLELLREVWQGAESRSFGYYLADLQEEEKQKWHKKIQANEEECQQKITACRKNIYQLENQQQDLQKELLQ
3HV8 Chain:A ((189-252))
-----------VQFIKIDGS----FVQDLNQVEN-QEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYL-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4916 for 319 contacts (15.4/contact) +
2D Compatibility (PS) -6114 + (NN) -1769 + (LL) 6132
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: -3935.0 ( -12.34 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3HV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HV8-query.scw
PDB file :
Tito_Scwrl_3HV8.pdb
: