Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINSRFYEGFEGEAELSFVAGDNKLLIWNGYFETILDNLLDCNVEREGVLKEYFNHEG----WYDDSPWMIEDNSLTIIQLKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE
2BMA Chain:A ((270-314))
----------------------------NGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVP--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1959 for 178 contacts (-11.0/contact) +
2D Compatibility (PS) -4239 + (NN) -1235 + (LL) 6124
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -4009.0 ( -22.52 by residue)
QMean score : 0.137
(partial model without unconserved sides chains):
PDB file :
Tito_2BMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BMA-query.scw
PDB file :
Tito_Scwrl_2BMA.pdb
: