Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDW-DFNNPESMKAWDLASGSYAEQVSG
1R12 Chain:A ((125-153))
CPDFKTCPVQARESFWGMASSSYAHSAEG
General information:
TITO was launched using:
RESULT:
Template:
1R12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2319 for 108 contacts (21.5/contact) +
2D Compatibility (PS) -2995 + (NN) -2303 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -5029.0 ( -46.56 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1R12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R12-query.scw
PDB file :
Tito_Scwrl_1R12.pdb
: