Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKFDLENGYVVKADGEMLVGGKFVVFKDSMKNWEPPYENKKLSESEVQEIIQQVKQSTNENTVQISFE
1NRJ Chain:B ((136-180))
---------------------------------RPPSKIKDALESEIQKVIERRKKSLNE--------
General information:
TITO was launched using:
RESULT:
Template:
1NRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8695 for 102 contacts (85.2/contact) +
2D Compatibility (PS) -2909 + (NN) -954 + (LL) 2828
1D Compatibility (HY) 0 + (ID) 600
Total energy: 7060.0 ( 69.22 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_1NRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NRJ-query.scw
PDB file :
Tito_Scwrl_1NRJ.pdb
: