Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKIKKILPQTIKSEVYFIDEIKNFDIVTEKMNDNFYTYRLGSNVMMWLNDEGVIGEIECIFPAQIDNLITLWEEKNTVVQNGFPMIDTDIVENKTFIPKVR--IFNHGDYFILYFSNMYKYNKEIISENLTFYAKDTELIAIKAELT |
1N1B Chain:A ((491-539)) | -----------------------------------------------------------------------WKDMNTAIAAGYPFPD-GMVAGAANIGRVAQFIYLHGDGF----SKTYEH-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6908 for 183 contacts (-37.7/contact) +
2D Compatibility (PS) -4432 + (NN) 346 + (LL) 8852
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -5342.0 ( -29.19 by residue)
QMean score : 0.171
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