Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQEKMGKFQDILYDGG--IYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSLEDFTFLLRNIKDVLRYEEF
3W5W Chain:A ((155-207))
---------------------------------------------RMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGIDKD---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1932 for 232 contacts (-8.3/contact) +
2D Compatibility (PS) -5058 + (NN) 721 + (LL) 5500
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -5169.0 ( -22.28 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_3W5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W5W-query.scw
PDB file :
Tito_Scwrl_3W5W.pdb
: