Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQNIQNAVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPSSAITQTTDGFKVDLGNLTDSVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELTKTDDSSQKNPLEGAEFKLVNGA----GATV------------QTG--LKTNADGKLAISNLKYDTYQLIETKAPQGYVLDASPVKFTIDDTHQSLFVSKENTAI-KGSVSLEKVDRDTKSLLADAEFELQDKDG--------NTLKTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKIS--TEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK |
| 4OQ1 Chain:A ((148-359)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTKVKLIKVDQDH--NRLEGVGFKLVSVARDVSAAAVPLIGEYRYSSSGQVGRTLYTDKNGEIFVTNLPLGNYRFKEVEPLAGYAVTTLDTDVQLVD-HQLVTITVVNQKLPRGNVDFMKVDGRTNTSLQGAMFKVMKEESGHYTPVLQNGKEVVVTSGKDGRFRVEGLEYGTYYLWELQAPTGYVQLTSPVSFTIGKD---ELVTVVKNNKR----PR------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2078 for 1199 contacts (-1.7/contact) +
2D Compatibility (PS) -19127 + (NN) 1618 + (LL) 18136
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -17351.0 ( -14.47 by residue)
QMean score : 0.515
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