Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPVRKGKIIDLCSGNGIIPLLLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRIDKEANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYGESE |
3LPM Chain:A ((5-249)) | --KLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP-----------------------MCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22173 for 1779 contacts (-12.5/contact) +
2D Compatibility (PS) -22327 + (NN) 4686 + (LL) 1904
1D Compatibility (HY) -6800 + (ID) 4500
Total energy: -49210.0 ( -27.66 by residue)
QMean score : 0.200
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