Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEKSGSPKWQLFKNILTYTIICLGGIIMLMPFVWMVSTAFKTGAANMVLPPQFIPKEPTTANFTQVFEMFPMLRFLVNSVIVAVVTTLGQMLFCSMAAYAFARIPFWGRDKLFLLYLATMMVPAQVTMIPQFILMKQFGWLDSYAGLIVPALFSVFGTFLLRQAFMGIPKELEEAAFMDGANHFTIFRKVILPLAKPTFATLGILTFMQSWNSYLWPLIVTSSQEMATLPLGLSLLQGRYGTNYGLMMAGVLI----------------SVIPILAVYLFAQKYFIQGMAMSGMKE |
| 4TQU Chain:N ((30-284)) | ------------------------------LYPIIYIFSMSISSGAAVTQGRVFLLPVDIDFSAYGRVLHDKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWFNAG--MIPFFLNMRDLGLLDNRFGILIGFACNAFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNGYFWAMVLLRAEE--KIPLQVYLKKTIVDLNVNEEFAGALLTNSYSMETVVGAIIVMSIIPVIIVYPVVQKYFTK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128592 for 1599 contacts (-80.4/contact) +
2D Compatibility (PS) -25025 + (NN) -12257 + (LL) 3404
1D Compatibility (HY) -27200 + (ID) 3700
Total energy: -193370.0 ( -120.93 by residue)
QMean score : 0.184
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