Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDASTSFAILPSNVKQKTAFERKVNQVKAASWTNNCLTGTLDIGQFSCYFVNEKIARVTVNPFGEVDLTPSIAAIHDNEKQAAKFTETNDCYELHFADKEVIVCKNPFQIIMKQAGKRIFQTEGLAINRDKEHQISIQSEPGTAIFGLGEKTGALNKAGSIISMWNTDVYSP-HNKDTVELYQSIPFMIADTAKTTYGLFYDNSHRTEFDFQSFEEMYT--VLAEGGQANLYIIFGEDVKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERIANTFKEKEIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPGIKKDVDYSVYQEGIKNNYFCTKLEGSIYYGDVWPGVSAFPDFLSTTVQHWWGSLHKFYTDLGIRGIWNDMNEPSVFNESKTMD--------------------------LDVV----------HNLDGKNVTHKEAHNLYGLYMSKATFEGLKRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGADVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGADAEKI--VKQYIELRYAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQAKRLVRLPKGLWFNYWTKEQFVGGDYI-----IADAPIDTMPIYIKAGTILPVGSSVQNTKETQELTLEVYLDSETATGYVYNDDGKSYQYESGAVSKTTLTATFKNGEVLINATHQGEANLQQKVTTIQVFGEKIDKITRAGI
3NUK Chain:A ((53-657))------------------------------------------------------------------------------------------------------------------------------------------------VYGLGESNRGINKRGYCYISNCTD--DPIHTEDKRSLYGAHNFIIV-SGKTTFGLFFDYPSKLTFDI-GYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRSYIPPKFAFGFGQSRYGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENIEDFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIAPVYEQNARGRYVYLPEEMKFIKFMPDGSISEEVLEKGVHYVDVALNEVPLFIRSGKCIPVAEAAECVKDIDTENMQL-IGYEGSSYTLYEDDGIHKDYDK---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -253624 for 4955 contacts (-51.2/contact) +
2D Compatibility (PS) -59817 + (NN) -23119 + (LL) 14348
1D Compatibility (HY) -53600 + (ID) 10100
Total energy: -385912.0 ( -77.88 by residue)
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_3NUK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NUK-query.scw
PDB file : Tito_Scwrl_3NUK.pdb: