Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGKPVIHEFIVVEGRDD----TTAINRSVIADTIETNGSALSQETIEKIRHAQELRG--VIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE
2I5R Chain:A ((7-87))
------VEKVIIVEGRSDKQKVAAVLNEPVV--IVCTNGT-ISDARLEEL--ADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDR---------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2I5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43424 for 458 contacts (-94.8/contact) +
2D Compatibility (PS) -8662 + (NN) -3611 + (LL) 7660
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -57487.0 ( -125.52 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_2I5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I5R-query.scw
PDB file :
Tito_Scwrl_2I5R.pdb
: