Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASK-FPALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK |
3FUU Chain:A ((6-267)) | ------SPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLP-VRLVFQDALLYPWEEV-------PQGSL-LVANLPYHIATPLVTRLLKTGRFA-RLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLT----PTGALDDPG-LFRLVEAAFGKRRKTLLNALAAAGYP-----KARVEEALRALGLPPRVRAEELDLEAFRRLREGL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -186399 for 2141 contacts (-87.1/contact) +
2D Compatibility (PS) -27308 + (NN) 155 + (LL) 2676
1D Compatibility (HY) -20800 + (ID) 5250
Total energy: -236926.0 ( -110.66 by residue)
QMean score : 0.522
|
|
|