Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQ-VQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
3FPP Chain:A ((217-308)) | ---------------------------------------------------------------LADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13323 for 496 contacts (-26.9/contact) +
2D Compatibility (PS) -9423 + (NN) -132 + (LL) 9180
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -19498.0 ( -39.31 by residue)
QMean score : 0.392
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