Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKW-NIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINN-----LPEAET--LLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
3ZBO Chain:A ((7-231))
-MDFKTVMQELEALGKERTKKIYISNGAHEPV--FGVATGAMKPIAKKIKL--NQELAEELYATGNYDAMYFAGIIADPKAMSESDFDRWIDGAYFYMLSD--YVVAVTLSESNIAQDVADKWIASGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHSPERTKSAMNNFLNTVAISYVPLHEKAVEIAKEVGIVEVKRDNKKSSLLNASESIQKELDRGR
General information:
TITO was launched using:
RESULT:
Template:
3ZBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90065 for 1749 contacts (-51.5/contact) +
2D Compatibility (PS) -23337 + (NN) -10509 + (LL) 652
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -139059.0 ( -79.51 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3ZBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZBO-query.scw
PDB file :
Tito_Scwrl_3ZBO.pdb
: