Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTV-DGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
1FEU Chain:A ((1-177))
MEYRLKAYYREGEKPSA---LRRAGKLPGLMYN-RHLNRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVVPP--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92527 for 1282 contacts (-72.2/contact) +
2D Compatibility (PS) -19117 + (NN) -5873 + (LL) 1952
1D Compatibility (HY) -14000 + (ID) 3250
Total energy: -132815.0 ( -103.60 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1FEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FEU-query.scw
PDB file :
Tito_Scwrl_1FEU.pdb
: