Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKAKSKVARIENRYIKDTATMKKTRSRRRIALFRRLAFMAIIFAVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKLARSEYYLSKDGEIIFNIPEENSKQKE
1EU8 Chain:A ((6-51))
-----------------------------------------IVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLD-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EU8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1833 for 238 contacts (-7.7/contact) +
2D Compatibility (PS) -4920 + (NN) -856 + (LL) 7068
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -3091.0 ( -12.99 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1EU8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EU8-query.scw
PDB file :
Tito_Scwrl_1EU8.pdb
: