Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVCCEMISDKGIAYRNAKTLDMLYIDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGCPVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAAERAGAAAVAMHGRTRVQMYEGSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD
1VHN Chain:A ((6-285))-----------KVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILSEKY--KWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEE--GVDEVFIHTRTVVQSFTGRAEWKALSVL--EKRIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGK-YSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYTKDLKGARRFR--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169925 for 2401 contacts (-70.8/contact) +
2D Compatibility (PS) -30198 + (NN) -10175 + (LL) 5104
1D Compatibility (HY) -16400 + (ID) 5550
Total energy: -227144.0 ( -94.60 by residue)
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_1VHN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VHN-query.scw
PDB file : Tito_Scwrl_1VHN.pdb: