Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIVKGGSERQYSVAAGLERCG-TGRVVLVHDGARPFITLDIIDRLLIGVEQSKAAICAVKVKDTVKRV-MNGVVQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLGTDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
1W77 Chain:A ((7-226))
----VILLAGG-------SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDV-DLRFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVV------TLWEMQTPQVIKPELLKKGFELVKSEGLEVT-DVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
General information:
TITO was launched using:
RESULT:
Template:
1W77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166627 for 1586 contacts (-105.1/contact) +
2D Compatibility (PS) -21993 + (NN) -2433 + (LL) 1532
1D Compatibility (HY) -18800 + (ID) 3600
Total energy: -211921.0 ( -133.62 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1W77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W77-query.scw
PDB file :
Tito_Scwrl_1W77.pdb
: