Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKVVSGA-HQGVAAQVAA---YQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDAKGSSDYRTMDVDMPLAIVIGSEGFGMSRLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKRFPLEK |
1GZ0 Chain:A ((17-242)) | --------------------RAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD----QPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92703 for 1565 contacts (-59.2/contact) +
2D Compatibility (PS) -22855 + (NN) 470 + (LL) 2308
1D Compatibility (HY) -2800 + (ID) 2700
Total energy: -118280.0 ( -75.58 by residue)
QMean score : 0.378
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