Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFN-----------KKEKAIDNALQRVKKKMMKQLE |
1OR7 Chain:A ((10-187)) | -----------LVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG-DVPDVVQEAFIKAYRAL-DSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPP------SSDVDAIEAENFESGGA-------------NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22246 for 936 contacts (-23.8/contact) +
2D Compatibility (PS) -17212 + (NN) -8662 + (LL) 3320
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -53900.0 ( -57.59 by residue)
QMean score : 0.410
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