Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIA----FEKTLQLLKMVNPAWIDKAAI-GYSNYLNLWRKNKNVYFDKEAMQFKVNL |
| 2QBY Chain:A ((312-378)) | --------------------------------------------------------------------YETYLNICKKLGVEAVTQRRVSDIINELDMVGILTAKVVNRGRYGKTKEIGLAVDKNIIVRSLIESD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2805 for 313 contacts (9.0/contact) +
2D Compatibility (PS) -6025 + (NN) 3111 + (LL) 5440
1D Compatibility (HY) -3200 + (ID) 850
Total energy: 1281.0 ( 4.09 by residue)
QMean score : -0.131
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