Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSG---SVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISME--NVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDY-GAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT |
| 4YNN Chain:A ((74-347)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIGSGVIIDPKNG--IIITNDHVIRNANLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKNLKSL-VIGDSDKLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSALKRS---DLNIEGVENF----IQTDAAINPGNAGGALVNAKGELIGINTAIISPYGGNV-GIGFAIPINMAKDVAQQIIKFGSIHRGLMGIFVQHLT--PELAQ----SMGYAEDFQGALVSQVNQNSPAQLAGLKSGDVIVQINDTKITQATQVKTTI--SLLRAGSTAKIKILRDNKPLTLDVEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72883 for 2204 contacts (-33.1/contact) +
2D Compatibility (PS) -28918 + (NN) -5336 + (LL) 9720
1D Compatibility (HY) -20800 + (ID) 5950
Total energy: -124167.0 ( -56.34 by residue)
QMean score : 0.472
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