Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAITAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILGEKITTKAEIERAAKKIYDMGVKAVVIKGGHSEMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAYRMEDGK |
| 4JJP Chain:A ((12-248)) | ------LTIAGSDSSGGAGIQADLKTFSAIGTYGMSVITAITAQNTKGVFAVEDLNKKIIKKQIEAVFEDIPPRAVKIGMVSSPEIILEIVENLKKYNPKYLVVDPVMISKSGYYLLKPEAKENLIKYLIPLAYIITPNIPEAEEITGIKIHNVDDMKRVGEEILQLGPKFVLMKGGHLD-GEAVDILVGKNIFKVYKSE----------GCTLSSAITSYLALGYEITEAVNLSKIYITEAIK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124956 for 1933 contacts (-64.6/contact) +
2D Compatibility (PS) -24800 + (NN) -4560 + (LL) 1064
1D Compatibility (HY) -21200 + (ID) 5750
Total energy: -180202.0 ( -93.22 by residue)
QMean score : 0.515
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