Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ
4JVY Chain:A ((146-175))
---VHIKLQAALEQVKKLLIPAPEGTDELKRKQ-----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4JVY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6234 for 110 contacts (56.7/contact) +
2D Compatibility (PS) -3317 + (NN) -2946 + (LL) 6880
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 4651.0 ( 42.28 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_4JVY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JVY-query.scw
PDB file :
Tito_Scwrl_4JVY.pdb
: