Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNTPEALIDLFEELKNLFETDTSLNNQNSSRLQEILTTATIRVRKASQTVELEARSVFQNIHTLCFVEKIHLNPEEANVLKEIEKIALSKGFWGGMNTLNVTNQFPSN
2IP6 Chain:A ((14-93))
---------LDLFTRLQFLLQKHDTI--EPYQYVLDILETGISKTKHNQQTPERQARVVYNKIASQALVDKLHFTAEENKVLAAINELAHS-------------------
General information:
TITO was launched using:
RESULT:
Template:
2IP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41249 for 553 contacts (-74.6/contact) +
2D Compatibility (PS) -8617 + (NN) -5244 + (LL) 712
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -61248.0 ( -110.76 by residue)
QMean score : 0.683
(partial model without unconserved sides chains):
PDB file :
Tito_2IP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IP6-query.scw
PDB file :
Tito_Scwrl_2IP6.pdb
: